hdf5_file.cpp File Reference

#include <algorithm>
#include <array>
#include <numeric>
#include <regex>
#include <sstream>
#include <utility>
#include "includes/kratos_parameters.h"
#include "input_output/logger.h"
#include "utilities/builtin_timer.h"
#include "utilities/data_type_traits.h"
#include "utilities/string_utilities.h"
#include "custom_utilities/data_type_utilities.h"
#include "hdf5_file.h"

Include dependency graph for hdf5_file.cpp:

Namespaces
	Kratos
	REF: G. R. Cowper, GAUSSIAN QUADRATURE FORMULAS FOR TRIANGLES.
	Kratos::HDF5
	Kratos::HDF5::Internals

Macros
#define	KRATOS_HDF5_CALL_WITH_RETURN(RETURN_VALUE, METHOD, ...)
#define	KRATOS_HDF5_CALL(METHOD, ...)
#define	KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION(...)
#define	KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION(...)

Functions
bool	Kratos::HDF5::Internals::IsPath (const std::string &rPath)
	Check if string is a valid path. More...
std::vector< hsize_t >	Kratos::HDF5::Internals::GetDataDimensions (const File &rFile, const std::string &rPath)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (int)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (double)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (std::string)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (Vector< int >)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (Vector< double >)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (array_1d< double, 3 >)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (array_1d< double, 4 >)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (array_1d< double, 6 >)
	Kratos::HDF5::KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION (array_1d< double, 9 >)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< int >)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< double >)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< array_1d< double, 3 >>)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< array_1d< double, 4 >>)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< array_1d< double, 6 >>)
	Kratos::HDF5::KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION (Vector< array_1d< double, 9 >>)

Macro Definition Documentation

KRATOS_HDF5_CALL

#define KRATOS_HDF5_CALL	(		METHOD,
			...
	)

Value:

    {                                                                              \
        const auto error = METHOD(__VA_ARGS__);                                    \
        KRATOS_ERROR_IF(error < 0) << "Error occured in " << #METHOD               \
                                   << " [ hdf5 error code = " << error << " ].\n"; \
    }

KRATOS_HDF5_CALL_WITH_RETURN

#define KRATOS_HDF5_CALL_WITH_RETURN	(		RETURN_VALUE,
			METHOD,
			...
	)

Value:

    RETURN_VALUE = METHOD(__VA_ARGS__);                         \
    KRATOS_ERROR_IF(RETURN_VALUE < 0)                           \
        << "Error occured in " << #METHOD                       \
        << " [ hdf5 error code = " << RETURN_VALUE << " ].\n";

KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION

#define KRATOS_HDF5_FILE_ATTRIBUTE_METHOD_INSTANTIATION

(

...

)

Value:

    template KRATOS_API(HDF5_APPLICATION) bool File::HasAttributeType<__VA_ARGS__>(const std::string&, const std::string&) const;   \
    template KRATOS_API(HDF5_APPLICATION) void File::WriteAttribute(const std::string&, const std::string&, const __VA_ARGS__&);    \
    template KRATOS_API(HDF5_APPLICATION) void File::ReadAttribute(const std::string&, const std::string&, __VA_ARGS__&) const;     \

KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION

#define KRATOS_HDF5_FILE_DATA_SET_METHOD_INSTANTIATION

(

...

)

Value:

    template KRATOS_API(HDF5_APPLICATION) void File::WriteDataSetImpl<__VA_ARGS__, File::DataTransferMode::Collective>(const std::string&, const __VA_ARGS__&, WriteInfo&);                     \
    template KRATOS_API(HDF5_APPLICATION) void File::ReadDataSetImpl<__VA_ARGS__, File::DataTransferMode::Collective>(const std::string&, __VA_ARGS__&, const unsigned, const unsigned) const;  \
    template KRATOS_API(HDF5_APPLICATION) void File::WriteDataSetImpl<__VA_ARGS__, File::DataTransferMode::Independent>(const std::string&, const __VA_ARGS__&, WriteInfo&);                    \
    template KRATOS_API(HDF5_APPLICATION) void File::ReadDataSetImpl<__VA_ARGS__, File::DataTransferMode::Independent>(const std::string&, __VA_ARGS__&, const unsigned, const unsigned) const; \
    template KRATOS_API(HDF5_APPLICATION) void File::WriteDataSet(const std::string&, const __VA_ARGS__&, WriteInfo&);                                                                          \
    template KRATOS_API(HDF5_APPLICATION) void File::WriteDataSetIndependent(const std::string&, const __VA_ARGS__&, WriteInfo&);                                                               \
    template KRATOS_API(HDF5_APPLICATION) void File::ReadDataSet(const std::string&, __VA_ARGS__&, const unsigned, const unsigned) const;                                                       \
    template KRATOS_API(HDF5_APPLICATION) void File::ReadDataSetIndependent(const std::string&, __VA_ARGS__&, const unsigned, const unsigned) const;                                            \